Peru

Health Overview
Key Health Risks
Health Risk Callout
Other Health Risks
Regional Information
Vaccine and Malaria Prevention
- Risk Level: Moderate
- Areas: Amazon basin only: Loreto (Iquitos), Madre de Dios, San Martin, Junin lowlands. No risk in Lima, Cusco, Machu Picchu, or highlands above 6,600 feet.
- Recommended Drug: Atovaquone-proguanil (Malarone) or Doxycycline for Amazon. Chloroquine may be used for some low-resistance areas.
- Drug Resistance: Yes
P. falciparum with some chloroquine resistance in Amazon basin — atovaquone-proguanil or doxycycline preferred for Loreto and Madre de Dios. No prophylaxis needed for Cusco, Sacred Valley, or Machu Picchu.
Physician Note
Peru is an amazing country and Machu Picchu is worth every bit of the preparation it requires. Altitude is the most important issue for most itineraries. Cusco sits at 11,150 feet and that is a real physiological problem, not a scenic detail. The protocol is simple: fly to Cusco, rest 24 to 48 hours, hydrate, and consider acetazolamide. Coca tea is genuinely helpful for mild symptoms.
Amazon itineraries are a different conversation, and one item on it is newer than the others. Alongside malaria and dengue, Peru now sits on the CDC's Oropouche notice, with the Loreto region most affected and surveillance suggesting the virus is endemically present rather than confined to the 2024-25 outbreak. Two things distinguish it. The vector is a biting midge rather than a mosquito, and midges pass through standard bed netting — so fine-mesh netting or screened accommodation does work that ordinary DEET-and-net advice does not. And roughly 60% of patients relapse days to weeks after appearing to recover, which means a returning traveler who improves and then deteriorates has not necessarily picked up something new. It is clinically hard to separate from dengue, so testing rather than pattern recognition is what settles it.
Be sure to consult your Dr. prior to travel to discuss
Pre-Departure Checklist
8+ Weeks
- Be sure to consult your Dr. prior to travel to discuss
- CDC recommends Get Yellow Fever vaccine if visiting Amazon. Complete Hep A/B, Typhoid. Discuss acetazolamide prescription.
2-4 Weeks
- Fill altitude medication and malaria prophylaxis if Amazon-bound
- Purchase evacuation insurance
- Plan 24-48hr acclimatization in Cusco
Day Of
- Begin acetazolamide 24hrs before altitude
- Pack DEET for Amazon, warm layers for highlands
- Carry printed hospital contacts for Lima and Cusco
Trip Type Guidance
Adventure
- Inca Trail and Amazon are the draws — altitude prep and malaria prophylaxis respectively are non-negotiable
Family
- Cusco and Sacred Valley excellent with acclimatization plan
Mission
- Verify altitude tolerance for highland communities
- Carry comprehensive kit.
Business
- Lima healthcare is excellent
- Sea-level city.

